Thanks for the response Douglas! I didn't state the current status correctly in my original post. I was able to access the terminal app in console when I first started getting the "connection refused" error but since I reset the devices I cannot access the console now. My network doesn't show up in the list during setup so I can't get passed that screen. I tried to connect one Omega to another and was able to get to the "Software" step but because the other doesn't have internet access the device just got hung up trying to load this step.
I was using both devices up until I tried installing NodeJS on the one that didn't have a SD card, the device ran out of memory and everything seemed messed up from that point. I tried putting an SD card and it seemed like my SSH connection was refused after that. I transferred the SD card to the other Omega and then it was connection refused there as well. I have removed the SD card from both at this point and tried a factory reset but still connection refused.
I found this topic where other people were having the same issue: https://github.com/OnionIoT/Onion-Console/issues/64 There is something mentioned about cookies but I think that is only related to accessing the console via omega-XXXX.local...I access via IP so I don't care about this and don't see how a browser cookie could stop SSH in other programs.